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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank45Aligned Residues245
% Identity24%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340.........350.........360.........370.........380........
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMC
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Template Sequence  EMYQRVKKLG. . . SGEVLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
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   60......... 70.........80.........90..... ....100.........110.........120.........130....
 
   389390.........400.........410.........420.........430.........440 .........450.........460.....
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Query Sequence  NGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLV. . . SEHNIVKIADFGLARFMKEDTYTAH
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Template Sequence  GGELFDEIIHRMK. . FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE
Template Known Secondary structure  S
BSS..

TT
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TT

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B

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   143......150..... ....160.........170.........180.........190.........200.........210.........220
 
   466...470.........480.........490.........500.........510.........520..... ....530.........540..
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Query Sequence  AGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGF. . . RMDGPQGCPPSVYRLML
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Template Sequence  . . RLGTAYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK
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   221........230.... .....240.........250..... ....260.........270.........280.........290......
 
   543......550.........560....
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Query Sequence  QCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  QMLQFDSQRRISAQQALEHPWI
Template Known Secondary structure  T
SSTTTS

T
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   297..300.........310........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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