Job Description P03949 Confidence 100.00% Date Fri May 3 21:46:51 BST 2013 Rank 293 Aligned Residues 228 % Identity 21% Template c3kn5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase alpha-5; PDBTitle: crystal structure of the c-terminal kinase domain of msk1 in complex2 with amp-pnp Resolution 2.40 Å

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		308	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure								.	.	.																																																			.
Query SS confidence								.	.	.																																																			.
Query Sequence		R	S	E	I	I	M	.	.	.	H	N	K	L	G	G	G	Q	Y	G	D	V	Y	E	G	Y	W	K	R	H	D	C	T	I	A	V	K	A	L	K	E	D	A	M	P	L	H	E	F	L	A	E	A	A	I	M	K	D	L	H	.	H	K	N	L	V	R	L	L	G	V	C	T	H	E	A	P	F	Y	I	I
Query Conservation								.	.	.																																																			.
Alig confidence								.	.	.																																.	.																		.
Template Conservation																																										.	.
Template Sequence		Y	Q	H	Y	D	L	D	L	K	D	K	P	L	G	E	G	S	F	S	I	C	R	K	C	V	H	K	K	S	N	Q	A	F	A	V	K	I	I	S	K	.	.	R	M	E	A	N	T	Q	K	E	I	T	A	L	K	L	C	E	G	H	P	N	I	V	K	L	H	E	V	F	H	D	Q	L	H	T	F	L	V
Template Known Secondary structure									S	S	S			S	B			T	T									T	T	T	T										G	.	.	G	G														T	T	T		T	T	B										S	S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.			460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	F	M	C	N	G	N	L	L	E	Y	L	R	R	T	D	K	S	L	L	P	P	I	I	L	V	Q	M	A	S	Q	I	A	S	G	M	S	Y	L	E	A	R	H	F	I	H	R	D	L	A	A	R	N	C	L	V	S	E	H	N	I	V	K	I	A	D	F	G	L	A	R	F	M	K	E	D	T	Y	T
Query Conservation
Alig confidence																				.	.																																							.																			.	.	.
Template Conservation																				.	.																																							.																			.	.	.
Template Sequence		M	E	L	L	N	G	G	E	L	F	E	R	I	K	K	K	K	H	.	.	F	S	E	T	E	A	S	Y	I	M	R	K	L	V	S	A	V	S	H	M	H	D	V	G	V	V	H	R	D	L	K	P	E	N	L	L	F	T	.	D	L	E	I	K	I	I	D	F	G	F	A	R	L	K	P	P	N	.	.	.
Template Known Secondary structure							S		B							T		S		.	.		B																					T	T								G	G	G					.										T	T								.	.	.
Template Predicted Secondary structure																				.	.																																							.																			.	.	.
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.			.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.		.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.								.	.	.	.	.	.	520	.	.	.	.				.	.	.	.	.	530	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.												.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.												.	.	.
Query Sequence		A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	F	N	T	F	S	S	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	A	P	Y	P	G	V	E	.	.	.	.	.	.	.	L	S	N	V	Y	G	L	L	E	N	G	.	.	.	F	R	M	D	G	P	Q	G	C
Query Conservation																																																				.	.	.	.	.	.	.												.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.										.	.	.	.	.	.	.												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	D	E	S	C	D	L	W	S	L	G	V	I	L	Y	T	M	L	S	.	G	Q	V	P	F	Q	S	H	D	R	S	L	T	C	T	S	A	V	E	I	M	K	K	I	K	K	G	D	F	S	F	E	G	E	A	W	K	N	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T																	.	S			T	T			S	S		S	S															T						S	T	T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
																						598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.		.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	S	V	Y	R	L	M	L	Q	C	W	N	W	S	P	S	D	R	P	R	F	R	D	I	H	F	N	L	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	E	A	K	D	L	I	Q	G	L	L	T	V	D	P	N	K	R	L	K	M	S	G	L	R	Y	N	E	W	L
Template Known Secondary structure																S	S	S									T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D