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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank211Aligned Residues254
% Identity25%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   304.....310.........320.........330.........340.... .....350.........360.........370.........380
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Query Sequence  WELDRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKE. . . DAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPF
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Template Sequence  LELQ. KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYI
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   4... ..10.........20.........30.........40.........50.........60.........70.........80..
 
   381........390....... ..400.........410.........420....
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Query Sequence  YIITEFMCNGNLLEYLR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RTDKSLLPPIILVQMASQIASGMSYLE
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Template Sequence  CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLH
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   425....430.........440 .........450.........460.........470.........480... ......490.........500
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Query Sequence  ARHFIHRDLAARNCLV. . SEHNIVKIADFGLARFMKEDTYTAHAGAKFPIKWTAPEGLAFN. . TFSSKSDVWAFGVLLWE
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Template Sequence  NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN. . . . . GAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL
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   168.170.........180.........190.........200....... ..210.........220.........230.........240..
 
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Query Sequence  IATYGMAPYPGVELSNVYGLLENG. . . FRMDGPQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  LLM. GAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI
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   251.. ......260.........270.........280.........290.........300.........310......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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