Job Description P03949 Confidence 100.00% Date Fri May 3 21:46:51 BST 2013 Rank 183 Aligned Residues 250 % Identity 20% Template c3h4jB_ PDB info PDB header:transferase Chain: B: PDB Molecule:snf1-like protein kinase ssp2; PDBTitle: crystal structure of pombe ampk kdaid fragment Resolution 2.80 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		S	E	I	I	M	H	N	K	L	G	G	G	Q	Y	G	D	V	Y	E	G	Y	W	K	R	H	D	C	T	I	A	V	K	A	L	K	.	.	.	.	E	D	A	M	P	L	H	E	F	L	A	E	A	A	I	M	K	D	L	H	H	K	N	L	V	R	L	L	G	V	C	T	H	E	A	P	F	Y	I	I	T
Query Conservation																																					.	.	.	.
Alig confidence																																					.	.	.	.
Template Conservation
Template Sequence		G	P	Y	I	I	R	E	T	L	G	E	G	S	F	G	K	V	K	L	A	T	H	Y	K	T	Q	Q	K	V	A	L	K	F	I	S	R	Q	L	L	K	K	S	D	M	H	M	R	V	E	R	E	I	S	Y	L	K	L	L	R	H	P	H	I	I	K	L	Y	D	V	I	T	T	P	T	D	I	V	M	V	I
Template Known Secondary structure		T	T											T	T									T	T	T																	T	T		S											T	T				T	T	B										S	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	M	C	N	G	N	L	L	E	Y	L	R	R	T	D	K	S	L	L	P	P	I	I	L	V	Q	M	A	S	Q	I	A	S	G	M	S	Y	L	E	A	R	H	F	I	H	R	D	L	A	A	R	N	C	L	V	S	E	H	N	I	V	K	I	A	D	F	G	L	A	R	F	M	K	E	D	T	Y	T	A
Query Conservation
Alig confidence																		.	.	.																																																							.
Template Conservation																		.	.	.																																																							.
Template Sequence		E	Y	A	G	G	E	L	F	D	Y	I	V	E	K	K	R	.	.	.	M	T	E	D	E	G	R	R	F	F	Q	Q	I	I	C	A	I	E	Y	C	H	R	H	K	I	V	H	R	D	L	K	P	E	N	L	L	L	D	D	N	L	N	V	K	I	A	D	F	G	L	S	N	I	M	.	T	D	G	N	F	L
Template Known Secondary structure																	S	.	.	.																								T							S	T	T	T					T	T								S	S		T	B	T	T	.	T	T	S	B	T	T
Template Predicted Secondary structure																		.	.	.																																																							.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	F	N	T	F	S	S	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	A	P	Y	P	G	V	E	L	S	N	V	Y	G	L	L	E	N	G	F	R	M	D	G	P	Q	G	C	P	P	S	V	Y	R	L	M	L	Q	C
Query Conservation
Alig confidence																																									.																						.
Template Conservation																																									.																						.
Template Sequence		K	T	S	C	G	S	P	N	Y	A	A	P	E	V	I	N	G	K	L	Y	A	G	P	E	V	D	V	W	S	C	G	I	V	L	Y	V	M	L	V	.	G	R	L	P	F	D	D	E	F	I	P	N	L	F	K	K	V	N	S	C	V	.	Y	V	M	P	D	F	L	S	P	G	A	Q	S	L	I	R	R	M
Template Known Secondary structure					T	T	S	T	T	T	S		G	G	G	S			S	G	G	G																			.	S	S		S	S	B		S	S	S	T	T		B					S	S		.					T	T	S										T	T
Template Predicted Secondary structure																																									.																						.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	N	W	S	P	S	D	R	P	R	F	R	D	I	H	F	N	L	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	A	D	P	M	Q	R	I	T	I	Q	E	I	R	R	D	P	W	F
Template Known Secondary structure		S		S	S	G	G	G	S							T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D