Job Description P03949 Confidence 100.00% Date Fri May 3 21:46:51 BST 2013 Rank 238 Aligned Residues 224 % Identity 23% Template c3famA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbon catabolite-derepressing protein kinase; PDBTitle: crystal structure of the protein kinase domain of yeast amp-2 activated protein kinase snf1 Resolution 2.20 Å

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		314	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		H	N	K	L	G	G	.	G	Q	Y	G	D	V	Y	E	G	Y	W	K	R	H	D	C	T	I	A	V	K	A	L	K	E	D	A	M	P	L	H	E	F	L	A	E	A	A	I	M	K	D	L	H	H	K	N	L	V	R	L	L	G	V	C	T	H	E	A	P	F	Y	I	I	T	E	F	M	C	N	G	N	L
Query Conservation								.
Alig confidence								.																														.																																							.
Template Conservation																																						.																																							.
Template Sequence		G	A	H	I	G	N	Y	Q	I	V	K	K	V	K	L	A	Y	H	T	T	T	G	Q	K	V	A	L	K	I	I	N	K	K	V	M	Q	.	G	R	I	E	R	E	I	S	Y	L	R	L	L	R	H	P	H	I	I	K	L	Y	D	V	I	K	S	K	D	E	I	I	M	V	I	E	Y	A	.	G	N	E	L
Template Known Secondary structure				B				B		S										T	T	T											S					.																T	T	B										S	S										.
Template Predicted Secondary structure																																						.																																							.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Y	L	R	R	T	D	K	S	L	L	P	P	I	I	L	V	Q	M	A	S	Q	I	A	S	G	M	S	Y	L	E	A	R	H	F	I	H	R	D	L	A	A	R	N	C	L	V	S	E	H	N	I	V	K	I	A	D	F	G	L	A	R	F	M	K	E	D	T	Y	T	A	H	A	G	A	K	F	P	I
Query Conservation
Alig confidence											.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	Y	I	V	Q	R	D	K	.	.	M	S	E	Q	E	A	R	R	F	F	Q	Q	I	I	S	A	V	E	Y	C	H	R	H	K	I	V	H	R	D	L	K	P	E	N	L	L	L	D	E	H	L	N	V	K	I	A	D	F	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	S	S	S	.	.																							T	T							S	G	G	G					T	T	S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	T	A	P	E	G	L	A	F	N	T	F	S	S	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	A	P	Y	P	G	V	E	L	S	N	V	Y	G	L	L	E	N	G	F	R	M	D	G	P	Q	G	C	P	P	S	V	Y	R	L	M	L	Q	C	W	N	W	S	P	S	D	R
Query Conservation
Alig confidence		.	.																														.																					.
Template Conservation		.	.																														.																					.
Template Sequence		.	.	S	P	N	Y	A	A	P	E	V	I	S	G	P	E	V	D	V	W	S	C	G	V	I	L	Y	V	M	L	C	.	R	R	L	P	F	D	D	E	S	I	P	V	L	F	K	N	I	S	N	G	.	V	Y	T	L	P	K	F	L	S	P	G	A	A	G	L	I	K	R	M	L	I	V	N	P	L	N	R
Template Known Secondary structure		.	.			T	T									T																	.	S	S		S	S			S	S											T	.						T	T	S												S		S	S	G	G	G	S
Template Predicted Secondary structure		.	.																														.																					.
Template SS confidence
				199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		553	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	F	R	D	I	H	F	N	L	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	I	H	E	I	M	Q	D	D	W	F
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D