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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank75Aligned Residues248
% Identity25%Templatec3dfaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase cgd3_920; PDBTitle: crystal structure of kinase domain of calcium-dependent protein kinase2 cgd3_920 from cryptosporidium parvum
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340... ......350.........360.........370.........380.....
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK. . . EDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITE
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   386...390.........400.........410.........420.........430.........440.........450.........460.....
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Query Sequence  FMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYTAH
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Template Sequence  LYTGELFDEIIKRKR. . . FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLK. DCDIKIIDFGLSTCFQQNTKMKD
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   85....90......... 100.........110.........120.........130....... ..140.........150.........160
 
   466...470.........480.........490.........500.........510.........520.... .....530.........540..
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Query Sequence  AGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENG. . . FRMDGPQGCPPSVYRLML
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Template Sequence  . . RIGTAYYIAPEVLR. GTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR
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   166...170......... 180.........190.........200 .........210.........220.........230.........240.
 
   543......550.........560....
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Query Sequence  QCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  KMLTFHPSLRITATQCLEHPWI
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   242.......250.........260...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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