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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank196Aligned Residues219
% Identity25%Templatec3cokB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase plk4; PDBTitle: crystal structure of plk4 kinase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340........ .350.........360.........370.........380....
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMP. . . . LHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIIT
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Template Sequence  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL
Template Known Secondary structure  GG
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   385....390.........400.........410.........420.........430.........440.........450.........460....
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Query Sequence  EFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYTA
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Template Sequence  EMCHNGEMNRYLKNRVKP. FSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQ. . . . . . . .
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   8990.........100...... ...110.........120.........130.........140.........150.........
 
   465....470.........480.........490.........500.........510.........520.........530.........540....
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Query Sequence  HAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMDGPQGCPPSVYRLMLQC
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Template Sequence  . . . . . . . . . . . . . . . . . . . . LKLESDVWSLGCMFYTLLI. GRPPFNTLNK. . . . . . . VVLADYEMPSFLSIEAKDLIHQL
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   160.........170........ .180........ .190.........200.........210.
 
   545....550.........560....
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Query Sequence  WNWSPSDRPRFRDIHFNLEN
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Template Sequence  LRRNPADRLSLSSVLDHPFM
Template Known Secondary structure  S
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   245....250.........260....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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