Return to main results Retrieve Phyre Job Id

Job DescriptionP03949
Confidence99.58%DateFri May 3 21:46:51 BST 2013
Rank407Aligned Residues102
% Identity34%Templatec2yt6A_
PDB info PDB header:cell cycleChain: A: PDB Molecule:adult male urinary bladder cdna, riken full- PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160.........170
Predicted Secondary structure 































































Query SS confidence 















































































Query Sequence  LVACSSMNSVNNVHDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYNKNNEWCEARLYSTRKNDASNQR
Query Conservation                                 
                
                               
Alig confidence 


























.



























.













.........
Template Conservation 


    
 
     
           .   

 

 
    


   

 
 

 .     

       .........
Template Sequence  SSGSSGASSSFSVVSSSYPTGLTGGVT. IFVALYDYEARTTEDLSFKKGERFQIIN. NTEGDWWEARSIAT. . . . . . . . .
Template Known Secondary structure 


















SS

SS

.SS



SSTTS



TT
.
S
TT
SSS.........
Template Predicted Secondary structure 

























.












.







.........
Template SS confidence 















































































   2.......10.........20........ .30.........40.........50...... ...60.........70
 
   171........180.........190.........200.....
Predicted Secondary structure 





























Query SS confidence 


































Query Sequence  RLGEIGWVPSNFIAPYNSLDKYTWYHGKISRSDSE
Query Conservation       
  
                 
   
    
Alig confidence  ..
































Template Conservation  ..
  
 


 

          
      
  

Template Sequence  . . GKSGYIPSNYVVPADSIQAEEWYFGKMGRKDAE
Template Known Secondary structure  ..


TTTSSS
TTT


S



Template Predicted Secondary structure  ..
















Template SS confidence 


































   71........80.........90.........100...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D