Return to main results Retrieve Phyre Job Id

Job DescriptionP03949
Confidence99.17%DateFri May 3 21:46:51 BST 2013
Rank418Aligned Residues113
% Identity27%Templatec2rqrA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:engulfment and cell motility protein 1, linker, dedicator PDBTitle: the solution structure of human dock2 sh3 domain - elmo1 peptide2 chimera complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.........90.........100.........110.........120.........130........
Predicted Secondary structure 









































































Query SS confidence 















































































Query Sequence  PDSVQMFRPTFDTFRPPNSDSSTFRGSQSREDLVACSSMNSVNNVHDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRK
Query Conservation                                                                 
                
Alig confidence 















































































Template Conservation 

 

            
  

      
                                  




 
    



  
Template Sequence  GSSGSSGRLLDLENIQIPDAPPPIPKEPSNYDFSGPSSGIEGRGSSGSSGSSGSSGDKERHGVAIYNFQGSGAPQLSLQI
Template Known Secondary structure 









SS





SS







SS



SS


TTTT








S
S



B
S
B


STTB

B
T
Template Predicted Secondary structure 



































































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   139140.........150.........160.........170.........180...
Predicted Secondary structure 


































Query SS confidence 












































Query Sequence  GDQVRILGYNKNNEWCEARLYSTRKNDASNQRRLGEIGWVPSNFI
Query Conservation 
                                    
  
    
Alig confidence 






..














..........










Template Conservation 

 
 
 ..
     
        ..........
  
 

 


Template Sequence  GDVVRIQ. . ETCGDWYRGYLIKHK. . . . . . . . . . MLQGIFPKSFI
Template Known Secondary structure  T
..TTSS
T..........T
GGGB
Template Predicted Secondary structure 

..








..........



Template SS confidence 












































   81...... ..90.........100.. .......110...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D