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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank265Aligned Residues255
% Identity27%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340... ......350.........360.........370.........380.......
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK. EDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFM
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Template Sequence  NNFDHKFLIGHGVFGKVYKGVLR. DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM
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SSS
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TT



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   3940.........50.........60. ........70.........80.........90.........100.........110.......
 
   388.390.........400... ......410.........420.........430.........440.........450.........460.....
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Query Sequence  CNGNLLEYLRRTDKSL. . LPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYTAH
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Template Sequence  ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKG. TELDQTH
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BTGGGSSSS


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   118.120.........130.........140.........150.........160.........170.........180......... 190......
 
   466...470.........480.........490.........500.........510.........520... ......
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Query Sequence  AGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLEN. . . . . . . . . . . . . . . . GFRMDG
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Template Sequence  LVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI
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TTT





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   197..200.........210.........220.........230.... .....240.........250.........260.........270.....
 
   530.........540.........550.........560......
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Query Sequence  PQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLENLI
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Template Sequence  RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL
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   278.280.........290.........300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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