Return to main results Retrieve Phyre Job Id

Job DescriptionP03949
Confidence99.87%DateFri May 3 21:46:51 BST 2013
Rank323Aligned Residues138
% Identity25%Templatec2oq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase zap-70; PDBTitle: tandem sh2 domains of zap-70 with 19-mer zeta1 peptide
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210. ........220.........230.........240.........250.........260....
Predicted Secondary structure 
















..
























Query SS confidence 
























. .




















































Query Sequence  NSLDKYTWYHGKISRSDSEAILGSG. . ITGSFLVRESETSIGQYTISVRHDGRVFHYRINVDNTEKMFITQEVKFRTLGE
Query Conservation            
   
      
   ..  
 

 
 
        
                                  
Alig confidence 
























..




















































Template Conservation         

 
 
 
  

  
       
 



 
    
   


     
 
  
               
 

  
Template Sequence  DPAAHLPFFYGSISRAEAEEHLKLAGXADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAE
Template Known Secondary structure 
TTTT
TTB
BS

TT

TT

SSSTT
TT
TTS
TTS

BSS
Template Predicted Secondary structure 






































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   265....270.........280.........290.........300.........310.........320......
Predicted Secondary structure 






































Query SS confidence 





























































Query Sequence  LVHHHSVHADGLICLLMYPASKKDKGRGLFSLSPNAPDEWELDRSEIIMHNKLGGGQYGDVY
Query Conservation 
         
                                         

 
 

 
 
Alig confidence 



























..































Template Conservation 

  
      
   
  
         ..       
                        
Template Sequence  LCEFYSRDPDGLPCNLRKPCNRPSGLEP. . QPGVFDCLRDAXVRDYVRQTWKLEGEALEQAI
Template Known Secondary structure 

TTSSS


SB



TT


..B




Template Predicted Secondary structure 

















..



















Template SS confidence 





























































   85....90.........100.........110.. .......120.........130.........140....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D