Return to main results Retrieve Phyre Job Id

Job DescriptionP03949
Confidence99.72%DateFri May 3 21:46:51 BST 2013
Rank381Aligned Residues102
% Identity28%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210.........220.........230.........240.........250.........260...
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  APYNSLDKYTWYHGKISRSDSEAILGSGITGSFLVRESETSIGQYTISVRHDGRVFHYRINVDNTEKMFITQEVKFRTLG
Query Conservation               
   
      
     
 

 
 
        
                                 
Alig confidence 



























































.


















Template Conservation 
    
    

 
 


  

 

     
 



 
        


       
  
.        
     
 

 
Template Sequence  GHMQDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKI. MTAEGLYRITEKKAFRGLT
Template Known Secondary structure 

SS
STTSSSS

S
TTB

SSS
S
SSS
.TTSSSSSSS
Template Predicted Secondary structure 




























.










Template SS confidence 















































































   661........670.........680.........690.........700.........710.........720 .........730.........
 
   264.....270... ......280......
Predicted Secondary structure 


.....










Query SS confidence 









. . . . .












Query Sequence  ELVHHHSVHA. . . . . DGLICLLMYPASK
Query Conservation   
        ..... 
           
Alig confidence 









.....












Template Conservation   

  
           
   
  
   
Template Sequence  ELVEFYQQNSLKDCFKSLDTTLQFPFKE
Template Known Secondary structure  TTS
SSS





B
S

Template Predicted Secondary structure 

















Template SS confidence 



























   740.........750.........760.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D