Return to main results Retrieve Phyre Job Id

Job DescriptionP03949
Confidence99.04%DateFri May 3 21:46:51 BST 2013
Rank443Aligned Residues75
% Identity21%Templatec2kymA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of the bem1p sh3-ci domain from l.elongisporus in2 complex with ste20p peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150.........160.........170.........180.........190.........200
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Query Sequence  VALYDFHGVGEEQLSLRKGDQVRILGYNKNNEWCEARLYSTRKNDASNQRRLGEIGWVPSNFIAPYNSLDKYTWYHGKIS
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Template Sequence  VTLYEFKAERDDELDVSPGENLSICA. HYDYEWFIAKPINRL. . . . . . . . . . GGPGLVPVSYVRIIDLMDPAKYASVDTY
Template Known Secondary structure 
S
B


STT


B
TT
.TTTSSS
..........S



GGG
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TTTSSSS
TT
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   5....10.........20.........30 .........40..... ....50.........60.........70...
 
   201.....
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Query Sequence  RSDSEA
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Template Conservation        
Template Sequence  DREQVM
Template Known Secondary structure  S
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   73.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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