Return to main results Retrieve Phyre Job Id

Job DescriptionP03949
Confidence98.96%DateFri May 3 21:46:51 BST 2013
Rank473Aligned Residues67
% Identity27%Templatec2k2mA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:eps8-like protein 1; PDBTitle: structural basis of pxxdy motif recognition in sh3 binding
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  SSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYNKNNEWCEARLYSTRKNDASNQRRLGEIGWVPSNFIAPYNSLD
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Template Sequence  PLGSGALKWVLCNYDFQARNSSELSVKQRDVLEVL. . DDSRKWWKVRDPA. . . . . . . . . . . . GQEGYVPYNILTPYPAAA
Template Known Secondary structure 







SS
B


SSSB

B
TT
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SSS
TT............S

GGG

S

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   474.....480.........490.........500........ .510.........520. ........530.........
 
   191
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Query Sequence  K
Query Conservation   
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Template Conservation 
Template Sequence  S
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   540
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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