Phyre 2 alignment of P03949 with c2dx1A

Job Description P03949
Confidence 99.00% Date Fri May 3 21:46:51 BST 2013

Rank 459 Aligned Residues 64

% Identity 27% Template c2dx1A_

PDB info PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crystal structure of rhogef protein asef

Resolution 2.36 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	114	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence	S	S	S	A	P	L	F	V	.	A	L	Y	D	F	H	G	V	G	E	E	Q	L	S	L	R	K	G	D	Q	V	R	I	L	G	Y	N	K	N	N	E	W	C	E	A	R	L	Y	S	T	R	K	N	D	A	S	N	Q	R	R	L	G	E	I	G	W	V	P	S	N	F	I	A	P	Y	N	S	L	D	K
Query Conservation									.
Alig confidence									.																										.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	S	D	G	S	V	V	C	A	E	A	L	W	D	H	V	T	X	D	D	Q	E	L	G	F	K	A	G	D	V	I	E	V	X	D	.	A	T	N	R	E	W	W	W	G	R	V	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	G	W	F	P	A	S	F	V	R	L	R	V	N	Q	D	A
Template Known Secondary structure			T								S	S		B					T	T	B			B		T	T								.			S	S	S							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G					S
Template Predicted Secondary structure																																			.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.														.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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Phyre2 is part of Genome3D