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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank93Aligned Residues252
% Identity23%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340.........350.........360.........370.........380........
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMC
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCP. ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS
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   7..10.........20.........30.........40...... ...50.........60.........70.........80.....
 
   389390.........400.........410.........420.........430.........440.........450........ .460.......
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Query Sequence  NGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMK. EDTYTAHAG
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Template Sequence  GGELFDRIEPDIG. . MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK
Template Known Secondary structure  TGGGGSBTTTB..

TT
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SGGG
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TT

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   8990.........100. ........110.........120.........130.........140.........150.........160......
 
   468.470.........480..... ....490.........500.........510.........520..... ....530.........540....
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Query Sequence  AKFPIKWTAPEGLAFNTF. SSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGF. . RMDGPQGCPPSVYRLMLQC
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Template Sequence  MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI
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S
GGGS

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   167..170.........180.........190.........200... ......210.........220.........230.........240.....
 
   545....550.........560....
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Query Sequence  WNWSPSDRPRFRDIHFNLEN
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Template Sequence  LVENPSARITIPDIKKDRWY
Template Known Secondary structure  S
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TTT
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   246...250.........260.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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