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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank6Aligned Residues424
% Identity43%Templatec2c0iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: src family kinase hck with bound inhibitor a-420983
Resolution2.30 Å
Model Dimensions (Å)X:85.096 Y:72.999 Z:51.506

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  LFVALYDFHGVGEEQLSLRKGDQVRILGYNKNNEWCEARLYSTRKNDASNQRRLGEIGWVPSNFIAPYNSLDKYTWYHGK
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Template Sequence  IVVALYDYEAIHHEDLSFQKGDQMVVL. . EESGEWWKARSLAT. . . . . . . . . . . RKEGYIPSNYVARVDSLETEEWFFKG
Template Known Secondary structure  SS
B


SSSB

B
TT
..TTTTT...........

GGGTTSGGGSTTTT
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   61........70.........80....... ..90.........100. ........110.........120.......
 
   199200........ .210.........220.........230... ......240.........250.........260.........270.
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Query Sequence  ISRSDSEAIL. . GSGITGSFLVRESETSIGQYTISVR. . . . . HDGRVFHYRINVDNTEKMFITQEVKFRTLGELVHHHSV
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Template Sequence  ISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKK
Template Known Secondary structure 

TSTT

TT

SSSTT
TTTB

STT
SSTTSSSTTS
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   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   272.......280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  HADGLICLLMYPASKKDKGRGLFSLSPNAPDEWELDRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLHE
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Template Sequence  GNDGLCQKLSVPCMSSK. . . . . . PQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKH. TKVAVKTMKPGSMSVEA
Template Known Secondary structure  S
SS
SS


SB




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TT
SB

GGGTTTTT.


SS
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   208.210.........220.... .....230.........240.........250.........260... ......270.........280
 
   352.......360.........370.........380.........390.........400.........410.........420.........430.
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Query Sequence  FLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHR
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Template Sequence  FLAEANVMKTLQHDKLVKLHAVV. TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR
Template Known Secondary structure  T


TTB

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SSS


TT
BSTTGGG

TT


S
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   281........290.........300... ......310.........320.........330.........340.........350.........
 
   432.......440.........450.........460.........470.........480.........490.........500.........510.
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Query Sequence  DLAARNCLVSEHNIVKIADFGLARFMKEDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPG
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Template Sequence  DLRAANILVSASLVCKIADFGLAR. . . . . . . . . . . . . VIPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG
Template Known Secondary structure 

SGGG
TT



TTGGG.............T

GGGS




TTT

SSTT
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   360.........370.........380... ......390.........400.........410.........420......
 
   512.......520.........530.........540.........550.........560.........570......
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Query Sequence  VELSNVYGLLENGFRMDGPQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLENLISSNSLNDEVQ
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Template Sequence  MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQEEIP
Template Known Secondary structure 

TT





TT

T
SSGGGS

TTTS
GGG




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   440.........450.........460.........470.........480.........490.........500....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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