Return to main results Retrieve Phyre Job Id

Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank180Aligned Residues232
% Identity20%Templatec2bvaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:p21-activated kinase 4; PDBTitle: crystal structure of the human p21-activated kinase 4
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   318.320.........330.........340.........350.........360.........370.........380.........390.......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  GGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLR
Query Conservation 
 
 

 
           

 
              
      
 
 


 
           

 
    
 
   
 
Alig confidence 


























.......













































Template Conservation     


 

          



 
  .......   
  

  
 




             



   
        
Template Sequence  NFIKIGIVCIATVRSSGKLVAVKKMDL. . . . . . . LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT
Template Known Secondary structure 











BTTS










.......TS


TTB

SSS




S
BTT
Template Predicted Secondary structure 





.......

















Template SS confidence 















































































   323......330.........340......... 350.........360.........370.........380.........390.....
 
   398.400.........410.........420.........430.........440.........450.........460.........470.......
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  RTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYTAHAGAKFPIKWTAP
Query Conservation                   

  

  

     




  


       

 


                       

Alig confidence 


...


















































....


















Template Conservation     ...                
                                  ....                   
Template Sequence  HTR. . . MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC. . . . AQVEVPRRKLVGTPYWMAP
Template Known Secondary structure  TS
...

TTB

S

SGGG
TTS



TT
....
B




B


S
GGG

Template Predicted Secondary structure 


...


























....















Template SS confidence 















































































   409410. ........420.........430.........440.........450.........460.. .......470.........480.
 
   478.480.........490.........500.........510.........520......... 530.........540.........550.....
Predicted Secondary structure 























..














Query SS confidence 



















































. .

























Query Sequence  EGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMDG. . PQGCPPSVYRLMLQCWNWSPSDRPRF
Query Conservation 
           



 
  
 
    
  
                     ..                   
  

  
Alig confidence 

























.
























..

























Template Conservation              













.
  

           
              
     

  

  

  


 
Template Sequence  ELISRLPYGPEVDIWSLGIMVIEMVD. GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA
Template Known Secondary structure  TT

B
TT.SS
TTTTS
TS




S

TT



SSGGGS

Template Predicted Secondary structure 









.


























Template SS confidence 















































































   485....490.........500.........510 .........520.........530.........540.........550.........560...
 
   556...560....
Predicted Secondary structure 
Query SS confidence 








Query Sequence  RDIHFNLEN
Query Conservation           
Alig confidence 








Template Conservation   


 

  
Template Sequence  AELLKHPFL
Template Known Secondary structure  TT
GGG
Template Predicted Secondary structure 

Template SS confidence 








   564.....570..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D