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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank59Aligned Residues241
% Identity27%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   303......310.........320.........330.........340... ......350.........360.........370........
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Query Sequence  EWELDRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK. . . . EDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEA
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT
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G..GG
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   127..130 .........140.........150.........160.........170.........180.........190.........200....
 
   379380.........390.........400.........410.........420.........430.........440.........450........
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Query Sequence  PFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMK
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Template Sequence  RVYLILEYAPLGTVYRELQKLSK. . FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . .
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TT
BSS..

TTT




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   205....210.........220....... ..230.........240.........250.........260.........270........
 
   459460.........470.........480.........490.........500.........510.........520.........530........
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Query Sequence  EDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMDGPQGCPPSVY
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Template Sequence  . . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTEGAR
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GGG

GGGTTTTSSGGG.SS
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   279280.........290.........300.........310.. .......320.........330... ......340.....
 
   539540.........550.........560....
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Query Sequence  RLMLQCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  DLISRLLKHNPSQRPMLREVLEHPWI
Template Known Secondary structure  S
SSGGGS

T
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   358.360.........370.........380...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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