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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank86Aligned Residues252
% Identity24%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   308.310.........320.........330.........340... ......350.........360.........370.........380....
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Query Sequence  RSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK. . . EDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIIT
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF
Template Known Secondary structure  TTTTTTTT


SS




TTB


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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   385....390.........400.........410.........420.........430.........440 .........450.........460.
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Query Sequence  EFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLV. . . SEHNIVKIADFGLARFMKEDT
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Template Sequence  DLVTGGELFEDIVAREF. . YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE
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S
BTT
S
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TT
B

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   90.........100...... ...110.........120.........130.........140.........150.........160.......
 
   462.......470.........480.........490.........500.........510.........520.........530 ........
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Query Sequence  YTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMDGP. . . QGCPPSVY
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Template Sequence  AWHG. . FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK
Template Known Secondary structure  B


..S
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B
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   169170.. .......180.........190.........200........ .210.........220.........230.........240.....
 
   539540.........550.........560....
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Query Sequence  RLMLQCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  SLIDSMLTVNPKKRITADQALKVPWI
Template Known Secondary structure  S
SSGGGS

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   246...250.........260.........270.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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