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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank250Aligned Residues246
% Identity17%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310...... ...320.........330.........340... ......350.........360.. .......370.........380.....
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Query Sequence  SEIIMHNK. LGGGQYGDVYEGYWKRHDCTIAVKALK. EDAMPLHEFLAEAAIMKDL. HHKNLVRLLGVCTHEAPFYIITE
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Template Sequence  DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE
Template Known Secondary structure  GS
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   386...390.........400.........410.........420.........430.........440.........450.........460.....
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Query Sequence  FMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYTAH
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Template Sequence  KMRGGSILSHIHKRRH. . FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH. . . . . . . PNQVSPVKICDFGPCG
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   161........170...... ...180.........190.........200.........210..... ....220.........230.
 
   466...470.........480.........490.........500.........510... ......520.... .....530.
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Query Sequence  AGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVE. . . . . . . . . . . LSNVYGLLENG. . . FRMDGPQ
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Template Sequence  SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDKDWA
Template Known Secondary structure  SGGG

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   253......260.........270.........280.........290 .........300.........310.........320.........330.
 
   532.......540.........550.........560....
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Query Sequence  GCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  HISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV
Template Known Secondary structure  TS
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   336...340.........350.........360........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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