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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank114Aligned Residues253
% Identity23%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   306...310.........320.........330.........340... ......350.........360. ........370.........380
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Query Sequence  LDRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK. . . . EDAMPLHEFLAEAAIMKD. LHHKNLVRLLGVCTHEAPF
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL
Template Known Secondary structure 

STT
SSTTT

GGG

STTTTTTTSSTTB


B
SS
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   381........390.........400.........410.........420.........430.........440.........450.........460
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Query Sequence  YIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKED
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Template Sequence  FFVIEYVNGGDLMFHMQRQRK. . LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP
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S
BTTSS..

TT
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T
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   320.........330.........340 .........350.........360.........370.........380.........390.......
 
   461........470.........480.........490.........500.........510.........520.........530.........540
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Query Sequence  TYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMDGPQGCPPSVYRL
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Template Sequence  GDTTS. . FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILEKQ. IRIPRSMSVKAASV
Template Known Secondary structure  T

B
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   398.400.. .......410.........420.........430........ .440.........450......... 460.........470...
 
   541........550.... .....560....
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Query Sequence  MLQCWNWSPSDRPR. . . . . . FRDIHFNLEN
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Template Sequence  LKSFLNKDPKERLGCLPQTGFADIQGHPFF
Template Known Secondary structure  T
SSSTTSTTTSTTTSGGG
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   484.....490.........500.........510...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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