Return to main results Retrieve Phyre Job Id

Job DescriptionP03949
Confidence99.17%DateFri May 3 21:46:51 BST 2013
Rank419Aligned Residues79
% Identity16%Templatec1x6gA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:megakaryocyte-associated tyrosine-protein kinase; PDBTitle: solution structures of the sh3 domain of human2 megakaryocyte-associated tyrosine-protein kinase.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  NVHDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYNKNNEWCEARLYSTRKNDASNQRRLGEIGWVPSN
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Template Sequence  SSGSSGRMPTRRWAPGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTS. . . . . . . . . . . GQEGLLAAG
Template Known Secondary structure 



SS




S

TT
SS
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TT


B
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SSSTTT...........

GG
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   2.......10.........20.........30.........40.........50.........60. ........70
 
   182.......190.
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Query Sequence  FIAPYNSLDK
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Template Conservation 

        
Template Sequence  ALRERSGPSS
Template Known Secondary structure  G


S

Template Predicted Secondary structure 




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   71........80
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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