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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank106Aligned Residues240
% Identity23%Templatec1mruB_
PDB info PDB header:transferaseChain: B: PDB Molecule:probable serine/threonine-protein kinase pknb; PDBTitle: intracellular ser/thr protein kinase domain of2 mycobacterium tuberculosis pknb.
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340... ......350.........360.........370.........380
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK. . . . EDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPF. . . .
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Template Sequence  DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP
Template Known Secondary structure  TT
SSTTTTSTTTTSSSST

BTTB


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   910.........20.........30.........40.........50.........60.........70.........80........
 
   381........390.........400.........410.........420.........430.........440.........450.........460
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Query Sequence  YIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKED
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Template Sequence  YIVMEYVDGVTLRDIVHTEGP. . MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR. . . . .
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TT
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   8990.........100......... 110.........120.........130.........140.........150.........160.
 
   461........470.........480.........490.........500.........510.........520........ .530.......
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Query Sequence  TYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMD. . . GPQGCPPSV
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Template Sequence  . . . . . . . . AITAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT. GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL
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   162.......170.........180.........190...... ...200.........210.........220.........230..
 
   538.540.........550.........560....
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Query Sequence  YRLMLQCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  DAVVLKALAKNPENRYQTAAEMRADLV
Template Known Secondary structure  T
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   248.250.........260.........270....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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