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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank130Aligned Residues246
% Identity38%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  VDRRSVRLIRQIGAGQFGEVWEGRWNVNV. . . . PVAVKKLKA. . . . GTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDE
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Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP
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B

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   121........130.........140.........150.........160.........170.........180.........190.........200
 
   307..310.........320.........330.........340.........350.........360.........370.........380......
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Query Sequence  PILIVTELMQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMKE
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Template Sequence  MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR. . . . .
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   201........210.........220.........230.........240.........250.........260.........270.....
 
   387..390.........400.........410.........420.........430.........440........ .450.........460.....
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Query Sequence  NEYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQV. DAGYRMPCPAGCPVTLY
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Template Sequence  . . . . . . . ALPVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY
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   276...280.........290.........300.........310.........320.........330.........340........
 
   466...470.........480.........490..
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Query Sequence  DIMQQCWRSDPDKRPTFETLQWKLEDL
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Template Sequence  NVMVQCWAHKPEDRPTFVALRDFLLEA
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SSGGGS

T
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   362.......370.........380........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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