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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank317Aligned Residues221
% Identity15%Templatec4gygA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rio2 kinase; PDBTitle: crystal structure of the rio2 kinase from chaetomium thermophilum
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VRLIRQIGAGQFGEVWEGRWNVNVPVAVKKLK. . . . . . . . . . . . . AGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDE
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Template Sequence  YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP
Template Known Secondary structure  S
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   307.. 310.........320.........330.........340.........350.........360.........370.........380
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Query Sequence  PIL. . . . . . IVTELMQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLA
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Template Sequence  EPIAQSRHTIVMSLVDALPMR. . . . . . QVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITL
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   178.180.........190........ .200.........210.........220.........230.........240.........250.
 
   381........390.........400.........410.........420.........430.........440.........450.......
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Query Sequence  RILMKENEYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMPCP. . .
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Template Sequence  TPIIID. . . . . FPQMVSMDHPNAEMYFDR. . . . . . . DVQCIKRFFERRF. HFVSTTPGPFYKDAKKTVGKDGAKRLDAAL
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   252..... ..260.........270..... ....280........ .290.........300.........310........
 
   458.460.........470.........
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Query Sequence  . . AGCPVTLYDIMQQCWRSDPDKR
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Template Sequence  EASGFTKKMAKDLEAAIREQQESR
Template Known Secondary structure  GGGT

TT
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   319320.........330.........340..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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