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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank226Aligned Residues252
% Identity23%Templatec4fr4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 32a; PDBTitle: crystal structure of human serine/threonine-protein kinase 32a (yank1)
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250......... 260.........270. ........280.........290.........300........
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Query Sequence  EVDRRSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLK. . . . AGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPI
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Template Sequence  DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM
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   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   309310.........320.........330.........340.........350.........360.........370.........380........
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Query Sequence  LIVTELMQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMKENE
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Template Sequence  FMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   389390.........400.........410.........420.........430.........440.........450 .........460......
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Query Sequence  YEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDA. . GYRMPCPAGCPVTLYD
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Template Sequence  ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR. GRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVS
Template Known Secondary structure  B



S
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   177..180.........190.........200.........210........ .220.........230.........240.........250.....
 
   467..470.........480. .....
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Query Sequence  IMQQCWRSDPDKRPT. FETLQ
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Template Sequence  LLKKLLEPNPDQRFSQLSDVQ
Template Known Secondary structure  S
SSTTTS

S
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   256...260.........270......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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