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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank272Aligned Residues246
% Identity20%Templatec4f9bC_
PDB info PDB header:transferase/transferase inhibitorChain: C: PDB Molecule:cell division cycle 7-related protein kinase; PDBTitle: human cdc7 kinase in complex with dbf4 and pha767491
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250.........260 .........270.........280.........290 .........300.........310..
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Query Sequence  RSVRLIRQIGAGQFGEVWEGRWN. . . . VNVPVAVKKLKAGTADPTDFLAEAQIMKKL. RHPKLLSLYAVCTRDEPILIVT
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Template Sequence  NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT. SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM
Template Known Secondary structure  GT
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   56...60.........70.........80.........90..... ....100.........110.........120.........130....
 
   313......320.........330.........340.........350.........360......... 370.........380.........390.
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Query Sequence  ELMQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNS. LSVKIADFGLARILMKENEYEA
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Template Sequence  PYLEHESFLDILNS. . . LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELL
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TT...

TT
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SGGGTTTT

GGG

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GGG
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   135....140........ .150.........160.........170.........180.........190.........200.........210.
 
   392... ....400.........410. ........420.........430.........440.........450
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Query Sequence  RTGA. . . . . RFPIKWTAPEAANYNR. FTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDA. . . . . . . . . . . . . . .
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Template Sequence  KFVQSEAQRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFG
Template Known Secondary structure  GG


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GGG

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   212.......220.........230.........240.........250.........260.........270.........280.........290.
 
   451........460.........470.........480.......
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Query Sequence  . . . . . . . . . . . . . . . . . GYRMPCPAGCPVTLYDIMQQCWRSDPDKRPTFETLQW
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Template Sequence  KSILCSKEVPAQDLRKLCERLRGWNEVPDEAYDLLDKLLDLNPASRITAEEALL
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SS







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T
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   445....450.........460.........470.........480.........490........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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