 |
| Job Description | O45539 | | Confidence | 100.00% | Date | Sat Apr 13 12:48:12 BST 2013 |
| Rank | 179 | Aligned Residues | 271 |
| % Identity | 16% | Template | c4apcA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:serine/threonine-protein kinase nek1; |
PDBTitle: crystal structure of human nima-related kinase 1 (nek1)
|
| Resolution | 2.10 Å |
|
 |
|   |   |
230 | . | . | . | . | . | . | . | . | . | |
|
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
|
|
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |
|  |  |  | . | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | D | Q | W | E | V | D | R | R | S | . |
. |
V | R | L | I | R | Q | I | G | A | G | Q | F | G | E | V | W | E | G | R | W | . |
N | V | N | V | P | V | A | V | K | K | L | K | A | G | T | A | D | P | T | D | . |
. |
. |
F | L | A | E | A | Q | I | M | K | K | L | R | H | P | K | L | L | S | L | Y | A | V | C | T |
| Query Conservation |   |
  |   |   |   |   |
|   |   |   |   | . | . |   |   |
|   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   | . |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |
| Template Sequence |   |
H | H | H | H | D | L | G | T | E | N | L | Y | F | Q | S | M | E | K | Y | V | R | L | Q | K | I | K | A | I | L | V | K | S | T | E | D | G | R | Q | Y | V | I | K | E | I | N | I | S | R | M | S | S | K | E | R | E | E | S | R | R | E | V | A | V | L | A | N | M | K | H | P | N | I | V | Q | Y | R | E | S | F | E |
| Template Known Secondary structure |   |
|
|
|
|
| T | T |
| S |
|
| B |
| S |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | B |
|
|  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|