Job Description O45539 Confidence 100.00% Date Sat Apr 13 12:48:12 BST 2013 Rank 43 Aligned Residues 247 % Identity 39% Template c4aojA_ PDB info PDB header:transferase Chain: A: PDB Molecule:high affinity nerve growth factor receptor; PDBTitle: human trka in complex with the inhibitor az-23 Resolution 2.75 Å

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		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.												.
Query SS confidence																															.	.	.												.
Query Sequence		W	E	V	D	R	R	S	V	R	L	I	R	Q	I	G	A	G	Q	F	G	E	V	W	E	G	R	W	N	V	.	.	.	N	V	P	V	A	V	K	K	L	K	A	.	G	T	A	D	P	T	D	F	L	A	E	A	Q	I	M	K	K	L	R	H	P	K	L	L	S	L	Y	A	V	C	T	R	D	E	P	I
Query Conservation																															.	.	.												.
Alig confidence																															.	.	.												.
Template Conservation
Template Sequence		H	H	I	K	R	R	D	I	V	L	K	W	E	L	G	E	G	A	F	G	K	V	F	L	A	E	C	H	N	L	L	P	K	M	L	V	A	V	K	A	L	K	E	A	S	E	S	A	R	Q	D	F	Q	R	E	A	E	L	L	T	M	L	Q	H	Q	H	I	V	R	F	F	G	V	C	T	E	G	R	P	L
Template Known Secondary structure			B			G	G	G											S	S									S	S	S												S			S															T	T				T	T	B									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.					.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		L	I	V	T	E	L	M	Q	E	N	L	L	T	F	L	Q	R	R	G	.	.	.	.	R	Q	C	Q	M	P	Q	L	V	E	I	S	A	Q	V	A	A	G	M	A	Y	L	E	E	M	N	F	I	H	R	D	L	A	A	R	N	I	L	I	N	N	S	L	S	V	K	I	A	D	F	G	L	A	R	I	L	M
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																																																						.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		L	M	V	F	E	Y	M	R	H	G	D	L	N	R	F	L	R	S	H	G	P	D	P	G	P	L	G	L	G	Q	L	L	A	V	A	S	Q	V	A	A	G	M	V	Y	L	A	G	L	H	F	V	H	R	D	L	A	T	R	N	C	L	V	G	Q	G	L	V	V	K	I	G	D	F	G	T	M	.	.	.	.
Template Known Secondary structure									T	T		B							T	S	S					S																							T	T				S				G	G	G					T	T	T											.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	N	E	Y	E	A	R	T	G	A	R	F	P	I	K	W	T	A	P	E	A	A	N	Y	N	R	F	T	T	K	S	D	V	W	S	F	G	I	L	L	T	E	I	V	T	F	G	R	L	P	Y	P	G	M	T	N	A	E	V	L	Q	Q	V	D	A	G	Y	R	M	P	C	P	A	G	C	P	V	T	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	P	I	R	W	M	P	P	E	S	I	L	Y	R	K	F	T	T	E	S	D	V	W	S	F	G	V	V	L	W	E	I	F	T	Y	G	K	Q	P	W	Y	Q	L	S	N	T	E	A	I	D	C	I	T	Q	G	R	E	L	E	R	P	R	A	C	P	P	E	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.			G	G	G							T	T																					T	T	S			T	T		S	S												T							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	I	M	Q	Q	C	W	R	S	D	P	D	K	R	P	T	F	E	T	L	Q	W	K	L	E	D	L	F	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	I	M	R	G	C	W	Q	R	E	P	Q	Q	R	H	S	I	K	D	V	H	A	R	L	Q	A	L	A	Q	A
Template Known Secondary structure											S	S	T	T	T	S																S
Template Predicted Secondary structure
Template SS confidence
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D