Return to main results Retrieve Phyre Job Id

Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank239Aligned Residues264
% Identity20%Templatec3tacA_
PDB info PDB header:transferase/protein bindingChain: A: PDB Molecule:peripheral plasma membrane protein cask; PDBTitle: crystal structure of the liprin-alpha/cask complex
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   223......230.........240.........250......... 260.........270 .........280.........290.....
Predicted Secondary structure 


















.



......










Query SS confidence 




































.










. . . . . .
























Query Sequence  QTTTFTYDDQWEVDRRSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKL. . . . . . KAGTADPTDFLAEAQIMKKLRHPKL
Query Conservation              
      
   

 
 

 
     .     



 
......            
   
  
 
 

Alig confidence 




































.










......
























Template Conservation      
            
 
   

 
 

 

 
        



 
                  
  

  
 
 

Template Sequence  SGLVPSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI
Template Known Secondary structure 









SS

SSTTT

TSTT




TTB
Template Predicted Secondary structure 
































Template SS confidence 















































































  
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D