Job Description O45539 Confidence 100.00% Date Sat Apr 13 12:48:12 BST 2013 Rank 38 Aligned Residues 237 % Identity 24% Template c3qa8A_ PDB info PDB header:immune system, signaling protein Chain: A: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta Resolution 3.60 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.							.	310	.
Predicted Secondary structure																					.																			.	.																																.	.	.	.	.	.
Query SS confidence																					.																			.	.																																.	.	.	.	.	.
Query Sequence		R	L	I	R	Q	I	G	A	G	Q	F	G	E	V	W	E	G	R	W	.	N	V	N	V	P	V	A	V	K	K	L	K	A	G	T	A	D	P	.	.	T	D	F	L	A	E	A	Q	I	M	K	K	L	R	H	P	K	L	L	S	L	Y	A	V	C	T	R	D	E	P	I	.	.	.	.	.	.	L	I	V
Query Conservation																					.																			.	.																																.	.	.	.	.	.
Alig confidence																					.																			.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		E	M	K	E	R	L	G	T	G	G	F	G	Y	V	L	R	W	I	H	Q	D	T	G	E	Q	V	A	I	K	Q	C	R	Q	E	L	S	P	K	N	R	E	R	W	C	L	E	I	Q	I	M	K	K	L	N	H	P	N	V	V	S	A	R	E	V	P	D	G	L	Q	K	L	A	P	N	D	L	P	L	L	A
Template Known Secondary structure									B		S	S	S	B							T	T	T	T										S																						B	T	T	B								T	T	T					T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																				.	.	.																																											.	.	.
Query SS confidence																				.	.	.																																											.	.	.
Query Sequence		T	E	L	M	Q	E	N	L	L	T	F	L	Q	R	R	G	R	Q	.	.	.	C	Q	M	P	Q	L	V	E	I	S	A	Q	V	A	A	G	M	A	Y	L	E	E	M	N	F	I	H	R	D	L	A	A	R	N	I	L	I	N	N	S	L	S	.	.	.	V	K	I	A	D	F	G	L	A	R	I	L	M	K
Query Conservation																				.	.	.																																											.	.	.
Alig confidence																				.	.	.																																											.	.	.
Template Conservation
Template Sequence		M	E	Y	C	E	G	G	D	L	R	K	Y	L	N	Q	F	E	N	C	C	G	L	K	E	G	P	I	R	T	L	L	S	D	I	S	S	A	L	R	Y	L	H	E	N	R	I	I	H	R	D	L	K	P	E	N	I	V	L	Q	P	G	P	Q	R	L	I	H	K	I	I	D	L	G	Y	A	K	E	L	D	Q
Template Known Secondary structure						S	S		B							S	S	S		T	T				S	S																			T	T	B							S	T	T							S	S	S							S						B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																																																						.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	N	E	Y	E	A	R	T	G	A	R	F	P	I	K	W	T	A	P	E	A	A	N	Y	N	R	F	T	T	K	S	D	V	W	S	F	G	I	L	L	T	E	I	V	T	F	G	R	L	P	Y	P	.	G	M	T	N	A	E	V	L	Q	Q	V	D	A	G	Y	R	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																																	.							.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.																																	.
Template Sequence		G	E	L	C	T	E	F	V	G	T	.	.	.	L	Q	Y	L	A	P	E	L	L	E	Q	K	K	Y	T	V	T	V	D	Y	W	S	F	G	T	L	A	F	E	C	I	T	.	G	F	R	P	F	L	P	N	W	Q	P	V	Q	W	H	G	K	V	R	I	V	V	Y	D	D	L	T	G	A	V	K	F	S	S
Template Known Secondary structure										S		.	.	.		T	T		S	S		S	S			S			S	T	T															S	.	S		S	S			S	S						S	S	T	T					S					S	S	S					S
Template Predicted Secondary structure												.	.	.																																	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
							454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	M	P	C	P	A	G	C	P	V	T	L	Y	D	I	M	Q	Q	C	W	R	S	D	P	D	K	R	P	T
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		V	L	P	T	P	N	H	L	S	G	I	L	A	G	K	L	E	R	W	L	Q	C	M	L	M	W	H	Q	R	T	D	P	Q
Template Known Secondary structure		S	S			S					G	G	G												S		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D