Job Description O45539 Confidence 99.66% Date Sat Apr 13 12:48:12 BST 2013 Rank 418 Aligned Residues 81 % Identity 23% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																				.											.	.	.	.	.	.
Query SS confidence																																																				.											.	.	.	.	.	.
Query Sequence		S	Q	P	W	Y	F	G	K	M	R	R	I	D	A	E	K	C	L	L	H	T	L	N	E	H	G	A	F	L	V	R	D	S	E	S	R	Q	H	D	L	S	L	S	V	R	E	N	D	S	V	.	K	H	Y	R	I	R	Q	L	D	H	.	.	.	.	.	.	G	G	Y	F	I	A	R	R	R	P	F	A	T
Query Conservation																																																				.											.	.	.	.	.	.
Alig confidence								.																.	.																											.											.	.	.	.	.	.
Template Conservation								.																.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	.	.	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H	D
Template Known Secondary structure				T	T			.												T	T	S		.	.	T	T								S	S		T	T										T	T											S		S	S	T	T	S			S					T	T				S	S
Template Predicted Secondary structure								.																.	.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		194	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	D	L	I	A	H	Y	Q	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	Q	I	I	V	E	Y	L	Q	N
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D