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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank23Aligned Residues252
% Identity24%Templatec3nyoB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein-coupled receptor kinase 6 in complex2 with amp
Resolution2.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QWEVDRRSVRLIRQIGAGQFGEVWEGRWN. VNVPVAVKKLKA. . . . GTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDE
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Template Sequence  RQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD
Template Known Secondary structure  TS


GGG



SSSTTT

TT


SSB


SS
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   178.180.........190.........200.........210.........220.........230.........240.........250.......
 
   307..310.........320......... 330.........340.........350.........360.........370.........380....
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Query Sequence  PILIVTELMQENLLTFLQRRGRQ. . CQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILM
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Template Sequence  ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP
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TTTSSSSS

TT




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   258.260.........270.........280.........290.........300.........310.........320.........330.......
 
   385....390.........400.........410.........420.........430.........440.........450.........460....
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Query Sequence  KENEYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMPCPAGCPVTL
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Template Sequence  EGQTIKGRVGT. . . VGYMAPEVVKNERYTFSPDWWALGCLLYEMIA. GQSPFQKKIKREEVERLVKEVPEEYSERFSPQA
Template Known Secondary structure  TT

B



S
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TT

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   338.340........ .350.........360.........370.........380 .........390.........400.........410...
 
   465....470.........480 .......
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Query Sequence  YDIMQQCWRSDPDKRP. . . . . TFETLQW
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Template Sequence  RSLCSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  S
S
GGGSTTTTTTT
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   417..420.........430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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