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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank237Aligned Residues243
% Identity23%Templatec3lm0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase 17b; PDBTitle: crystal structure of human serine/threonine kinase 17b (stk17b)
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250......... 260.........270.. .......280.........290. ........300.........
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Query Sequence  VDRRSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKA. . . GTADPTDFLAEAQIMKKLR. HPKLLSLYAVCTRDEPIL
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Template Sequence  FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII
Template Known Secondary structure 
SSTTT

STT
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SS
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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   310.........320....... ..330.........340.........350.........360.........370.........380.......
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Query Sequence  IVTELMQENLLTFLQRRG. . RQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMKEN
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Template Sequence  LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILL. . . . . . . SSIYPLGDIKIVDF
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TTGGGGGSGGG
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GGG.......S
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   108.110.........120.........130.........140.........150.........160...... ...170.........180
 
   388.390.........400.........410.........420.........430.........440.........450....... ..460....
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Query Sequence  EYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMPCP. . . AGCPVTL
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Template Sequence  GMSRKI. . MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT. HTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLA
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   181..... ...190.........200.........210.........220. ........230.........240.........250.......
 
   465....470.........480.......
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Query Sequence  YDIMQQCWRSDPDKRPTFETLQW
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Template Sequence  TDFIQSLLVKNPEKRPTAEICLS
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   267..270.........280.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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