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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank74Aligned Residues240
% Identity27%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250......... 260.........270.........280.........290.........300.........310......
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Query Sequence  RSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKAGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVTELMQ
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
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TTB


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   60.........70.. .......80.........90..... ....100.........110.........120.........130....
 
   317..320.........330.........340.........350.........360...... ...370.........380.........390...
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Query Sequence  ENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILI. . . NNSLSVKIADFGLARILMKENEYEART
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Template Sequence  GGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL
Template Known Secondary structure  S
BSS

TT
S

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B



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   143......150.........160.........170.........180.........190.........200.........210.........220..
 
   394.....400.........410.........420.........430.........440.........450.. .......460.........470
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Query Sequence  GARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGY. . . RMPCPAGCPVTLYDIMQQ
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Template Sequence  GT. . . AYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ
Template Known Secondary structure  S
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T.T
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SGGGTTS
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   223. .....230.... .....240.........250..... ....260.........270.........280.........290.......
 
   471........480.......
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Query Sequence  CWRSDPDKRPTFETLQW
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Template Sequence  MLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   298.300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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