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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank201Aligned Residues243
% Identity26%Templatec3kvwA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity tyrosine-phosphorylation-regulated kinase PDBTitle: crystal structure of dual-specificity tyrosine phosphorylation2 regulated kinase 2 (dyrk2) in complex with an indirubin ligand
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250......... 260.........270.........280.........290.. .......300.........310
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Query Sequence  RSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKAGTADPTDFLAEAQIMKKLRH. . . . . . PKLLSLYAVCTRDEPILI
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Template Sequence  YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM
Template Known Secondary structure  TTSSSTTTT
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TT
TTS
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B

TT
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   147..150.........160.........170.........180.........190.........200.........210.........220......
 
   311........320......... 330.........340.........350.........360.........370 .........380.......
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Query Sequence  VTELMQENLLTFLQRRGRQ. CQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSL. . SVKIADFGLARILMKEN
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Template Sequence  TFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV
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BTTT



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SGGGSSTTS




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   227..230.........240.........250.........260.........270.........280.........290.........300......
 
   388.390.........400.........410.........420.........430.........440.........450.....
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Query Sequence  EYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMP. . . . . . . . . . . .
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Template Sequence  YTIQSR. . . . . . FYRAPEVILGARYGMPIDMWSLGCILAELLT. GYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAK
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G......GG

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   307..310.. .......320.........330.........340... ......350.........360.........370.........
 
   456...460.........470.........480.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CPAGCPVTLYDIMQQCWRSDPDKRPTFETLQW
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Template Sequence  NFVSKGYPRYCTVTTLSDVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR
Template Known Secondary structure  B



BTTS








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   381........390.........400.........410.........420.........430.........440.........450.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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