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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank158Aligned Residues241
% Identity17%Templatec3kl8C_
PDB info PDB header:transferase/ transferase inhibitorChain: C: PDB Molecule:calcium/calmodulin dependent protein kinase ii; PDBTitle: camkiintide inhibitor complex
Resolution3.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250......... 260.........270.........280.........290.........300.........310......
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Query Sequence  RSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKAGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVTELMQ
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Template Sequence  DNYDV. . . . . KEELSVVRRCVHKTTGLEFAAKIINTD. . . FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT
Template Known Secondary structure  TT
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   317..320.........330.........340.........350.........360.........370.........380.........390......
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Query Sequence  ENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMKENEYEARTGAR
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Template Sequence  GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA
Template Known Secondary structure  S
BSS

TTT
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   397..400.........410.........420.........430.........440.........450........ .460.........470...
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Query Sequence  FPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMPCPA. . . GCPVTLYDIMQQCWR
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Template Sequence  GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT
Template Known Secondary structure  S
TTT

TT

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   174.....180.........190.........200....... ..210.........220.........230.........240.........250..
 
   474.....480.......
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Query Sequence  SDPDKRPTFETLQW
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Template Sequence  VNPKKRITADQALK
Template Known Secondary structure  SSGGGS

TT
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   253......260......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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