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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank178Aligned Residues238
% Identity26%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKA. . GTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVTEL
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL
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TTT

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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   315....320.........330.........340.........350.........360...... ...370.........380.........390.
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Query Sequence  MQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILI. . . NNSLSVKIADFGLARILMKENEYEA
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Template Sequence  YTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTT. . .
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   155....160.........170.........180.........190.........200.........210.........220.........230.
 
   392.......400.........410.........420.........430.........440.........450.. .......460........
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Query Sequence  RTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGY. . . RMPCPAGCPVTLYDIM
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Template Sequence  . . . . . . . . AYYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI
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   239240.........250.........260......... 270.........280.........290.........300.........
 
   469470.........480.......
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Query Sequence  QQCWRSDPDKRPTFETLQW
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Template Sequence  RKMLTFHPSLRITATQCLE
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   310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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