Job Description O45539 Confidence 100.00% Date Sat Apr 13 12:48:12 BST 2013 Rank 183 Aligned Residues 245 % Identity 24% Template c3h4jB_ PDB info PDB header:transferase Chain: B: PDB Molecule:snf1-like protein kinase ssp2; PDBTitle: crystal structure of pombe ampk kdaid fragment Resolution 2.80 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																								.													.	.	.	.
Query SS confidence																								.													.	.	.	.
Query Sequence		R	S	V	R	L	I	R	Q	I	G	A	G	Q	F	G	E	V	W	E	G	R	W	.	N	V	N	V	P	V	A	V	K	K	L	K	.	.	.	.	A	G	T	A	D	P	T	D	F	L	A	E	A	Q	I	M	K	K	L	R	H	P	K	L	L	S	L	Y	A	V	C	T	R	D	E	P	I	L	I	V	T
Query Conservation																								.													.	.	.	.
Alig confidence																								.													.	.	.	.
Template Conservation
Template Sequence		G	P	Y	I	I	R	E	T	L	G	E	G	S	F	G	K	V	K	L	A	T	H	Y	K	T	Q	Q	K	V	A	L	K	F	I	S	R	Q	L	L	K	K	S	D	M	H	M	R	V	E	R	E	I	S	Y	L	K	L	L	R	H	P	H	I	I	K	L	Y	D	V	I	T	T	P	T	D	I	V	M	V	I
Template Known Secondary structure		T	T											T	T									T	T	T																	T	T		S											T	T				T	T	B										S	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	M	Q	E	N	L	L	T	F	L	Q	R	R	G	R	Q	C	Q	M	P	Q	L	V	E	I	S	A	Q	V	A	A	G	M	A	Y	L	E	E	M	N	F	I	H	R	D	L	A	A	R	N	I	L	I	N	N	S	L	S	V	K	I	A	D	F	G	L	A	R	I	L	M	K	E	N	E	Y	E	A	R
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		E	Y	A	G	G	E	L	F	D	Y	I	V	E	K	.	K	R	M	T	E	D	E	G	R	R	F	F	Q	Q	I	I	C	A	I	E	Y	C	H	R	H	K	I	V	H	R	D	L	K	P	E	N	L	L	L	D	D	N	L	N	V	K	I	A	D	F	G	L	S	N	I	M	T	D	G	N	F	L	K	T	S
Template Known Secondary structure																.		S																								T							S	T	T	T					T	T								S	S		T	B	T	T	T	T	S	B	T	T
Template Predicted Secondary structure																.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	A	R	F	P	I	K	W	T	A	P	E	A	A	N	Y	N	R	F	T	T	K	S	D	V	W	S	F	G	I	L	L	T	E	I	V	T	F	G	R	L	P	Y	P	G	M	T	N	A	E	V	L	Q	Q	V	D	A	G	Y	R	M	P	C	P	A	G	C	P	V	T	L	Y	D	I	M	Q	Q	C	W
Query Conservation
Alig confidence			.	.																																				.																					.
Template Conservation			.	.																																				.																					.
Template Sequence		C	.	.	G	S	P	N	Y	A	A	P	E	V	I	N	G	K	L	Y	A	G	P	E	V	D	V	W	S	C	G	I	V	L	Y	V	M	L	V	.	G	R	L	P	F	D	D	E	F	I	P	N	L	F	K	K	V	N	S	C	.	V	Y	V	M	P	D	F	L	S	P	G	A	Q	S	L	I	R	R	M	I
Template Known Secondary structure		T	.	.	T	S	T	T	T	S		G	G	G	S			S	G	G	G																			.	S	S		S	S	B		S	S	S	T	T		B					S	S	.						T	T	S										T	T	S
Template Predicted Secondary structure			.	.																																				.																					.
Template SS confidence
		191			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	D	P	D	K	R	P	T	F	E	T	L	Q	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	D	P	M	Q	R	I	T	I	Q	E	I	R	R
Template Known Secondary structure			S	S	G	G	G	S							T	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D