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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank250Aligned Residues241
% Identity26%Templatec3enmC_
PDB info PDB header:transferaseChain: C: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 6; PDBTitle: the structure of the map2k mek6 reveals an autoinhibitory dimer
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250......... 260.........270.. .......280....... ..290.........300.........310
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Query Sequence  VDRRSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKA. . GTADPTDFLAEAQIM. KKLRHPKLLSLYAVCTRDEPILI
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Template Sequence  VKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWI
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   48.50.........60.........70.........80.........90.........100.........110.........120.......
 
   311........320. ........330.........340.........350.. .......360.........370.........380......
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Query Sequence  VTELMQENLLT. . . FLQRRGRQCQMPQLVEISAQVAAGMAYLEEM. NFIHRDLAARNILINNSLSVKIADFGLARILMKE
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Template Sequence  CXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD
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   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   387..390.........400.........410. ........420.........430.........440. ........450.........460...
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Query Sequence  NEYEARTGARFPIKWTAPEAANYNR. FTTKSDVWSFGILLTEIVTFGRLPYPGMTN. . AEVLQQVDAGYRMPCPAGCPVT
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Template Sequence  VK. . . . . . . . . . . PYXAPERINPELNQSVKSDIWSLGITXIELAI. LRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAE
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   208. 210.........220.........230.........240. ........250.........260.........270.....
 
   464.....470.........480.......
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Query Sequence  LYDIMQQCWRSDPDKRPTFETLQW
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Template Sequence  FVDFTSQCLKKNSKERPTYPELXQ
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   287..290.........300.........310
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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