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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank89Aligned Residues250
% Identity24%Templatec3d9vA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rho-associated protein kinase 1; PDBTitle: crystal structure of rock i bound to h-1152p a di-2 methylated variant of fasudil
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250......... 260.........270. ........280.........290.........300........
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Query Sequence  EVDRRSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLK. . . . AGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPI
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Template Sequence  RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL
Template Known Secondary structure  S

GGG
SSSTTT

SS
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   70.........80.........90.........100.........110.........120.........130.........140.........
 
   309310.........320.........330.........340.........350.........360.........370.........380........
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Query Sequence  LIVTELMQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMKENE
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Template Sequence  YMVMEYMPGGDLVNLMSN. YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM
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TT.S


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   389390.........400....... ..410.........420.........430.........440.........450. ........460.
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Query Sequence  YEARTGARFPIKWTAPEAA. . . . NYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAG. . . YRMPCPAGCP
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Template Sequence  VRCDTAVGTPD. YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV. GDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS
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   229230......... 240.........250.........260.........270... ......280.........290.........300......
 
   462.......470......... 480.......
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Query Sequence  VTLYDIMQQCWRSDPDKR. . . PTFETLQW
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Template Sequence  KEAKNLICAFLT. DREVRLGRNGVEEIKR
Template Known Secondary structure  SS.
TTT
TTTT
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   307..310........ .320.........330....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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