Return to main results Retrieve Phyre Job Id

Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank208Aligned Residues213
% Identity25%Templatec3cokB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase plk4; PDBTitle: crystal structure of plk4 kinase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250......... 260.........270.. .......280.........290.........300.........310..
Predicted Secondary structure 






.





....










Query SS confidence 





















.












. . . .







































Query Sequence  RSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKA. . . . GTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVT
Query Conservation      
   

 
 

 
     .     



 
  ....          
   
  
 
 


   
         

 
Alig confidence 





















.












....







































Template Conservation    
     

 
 

 
  
    
   



 
                
   
  
 
  

                
Template Sequence  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL
Template Known Secondary structure  GG
SSTTT

TT
TT


TTB


SS
Template Predicted Secondary structure 





























Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.........80........
 
   313......320 .........330.........340.........350.........360.........370.........380.........390.
Predicted Secondary structure 





.







































Query SS confidence 







.






































































Query Sequence  ELMQENLL. TFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMKENEYEA
Query Conservation 
   
 

.  
              
   
   
  

    

 

   
 
       

 




           
Alig confidence 







.





























































.........
Template Conservation 
      
                      
             
   

 

        

 
      .........
Template Sequence  EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQ. . . . . . . . .
Template Known Secondary structure 


TTT
SS


TT
S


GGG
TTS



TT
.........
Template Predicted Secondary structure 












































.........
Template SS confidence 















































































   8990.........100.........110.........120.........130.........140.........150.........
 
   392.......400.........410.........420.........430.........440.........450.........460.........470.
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  RTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMPCPAGCPVTLYDIMQQC
Query Conservation           
 


       
 





 



 

 
 
  

           
  
     
   
     

  
Alig confidence  ....................


















.









.......






















Template Conservation  ....................     





 




 
.
  

     .......
       
   
     

   
Template Sequence  . . . . . . . . . . . . . . . . . . . . LKLESDVWSLGCMFYTLLI. GRPPFNTLNK. . . . . . . VVLADYEMPSFLSIEAKDLIHQL
Template Known Secondary structure  ....................


.SS



TTS
.......








TTS
Template Predicted Secondary structure  ....................







.








.......









Template SS confidence 















































































   160.........170........ .180........ .190.........200.........210.
 
   472.......480.......
Predicted Secondary structure 






Query SS confidence 















Query Sequence  WRSDPDKRPTFETLQW
Query Conservation 
   
  


   
  
Alig confidence 















Template Conservation 
  

  
 
  


 
Template Sequence  LRRNPADRLSLSSVLD
Template Known Secondary structure  S
SSGGGS

TT
Template Predicted Secondary structure 







Template SS confidence 















   245....250.........260
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D