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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank228Aligned Residues240
% Identity24%Templatec3cekA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human dual specificity protein kinase (ttk)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   231........240.........250.........260.........270....... ..280.........290. ........300.....
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Query Sequence  DQWEVDRRSVRLIRQIGAGQFGEVWEGRWNVNVPVAVKKLKAGTADP. . . TDFLAEAQIMKKLR. . HPKLLSLYAVCTRD
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Template Sequence  QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD
Template Known Secondary structure 
TT

SS
TT


SS

GGG
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S
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   516...520.........530.........540.........550.........560.........570.........580.........590.....
 
   306...310.........320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  EPILIVTELMQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMK
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Template Sequence  QYIYMVMECGNIDLNSWLKKK. KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD. GMLKLIDFGIA. . . . .
Template Known Secondary structure  S


S
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GGGT.T


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   596...600.........610...... ...620.........630.........640.........650....... ..660........
 
   386...390.........400.........410. ........420.........430........ .440.........450.. .......460..
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Query Sequence  ENEYEARTGARFPIKWTAPEAANYNR. FTTKSDVWSFGILLTEIVTFGRLPYPG. MTNAEVLQQVDAGY. RMPCPAGCPV
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Template Sequence  . . . . . . . . . NQGTVNYMPPEAIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK
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TT




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   669670.........680.........690.........700..... ....710.........720.........730........
 
   463......470.........480.......
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Query Sequence  TLYDIMQQCWRSDPDKRPTFETLQW
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Template Sequence  DLQDVLKCCLKRDPKQRISIPELLA
Template Known Secondary structure  T
SSTTTS

T
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   763......770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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