Return to main results Retrieve Phyre Job Id

Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank36Aligned Residues251
% Identity24%Templatec3c4yA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of apo form of g protein coupled receptor kinase 12 at 7.51a
Resolution7.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250......... 260.........270.. .......280.........290.........300.......
Predicted Secondary structure 








.





....










Query SS confidence 


























.












. . . .


































Query Sequence  WEVDRRSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKA. . . . GTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEP
Query Conservation    
      
   

 
 

 
     .     



 
  ....          
   
  
 
 


   
       
Alig confidence 


























.












....


































Template Conservation    
    
     

 
 

 

      

   


 
                
   
  
 

 

 
         
Template Sequence  QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD
Template Known Secondary structure  S


GGGB





SSSTTTTTTT
TT


TTB

B

SS
Template Predicted Secondary structure 





























Template SS confidence 















































































   180.........190.........200.........210.........220.........230.........240.........250.........
 
   308.310.........320.... .....330.........340.........350.........360.........370.........380...
Predicted Secondary structure 





....


































Query SS confidence 
















. . . .


























































Query Sequence  ILIVTELMQENLLTFLQ. . . . RRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARIL
Query Conservation    

 
   
 

  
 ....             
   
   
  

    

 

   
 
       

 




   
Alig confidence 
















....


























































Template Conservation    

 
   

 
   
         
 
        

  

  

   







 



      

 




   
Template Sequence  LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL
Template Known Secondary structure 



STTTSSSS
S

TSB





GGG
SSS



SS

B
Template Predicted Secondary structure 






























Template SS confidence 















































































   260.........270.........280.........290.........300.........310.........320.........330.........
 
   384.....390.........400.........410.........420.........430......... 440.........450.........460.
Predicted Secondary structure 

























..












Query SS confidence 























































. .





















Query Sequence  MKENEYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGM. . TNAEVLQQVDAGYRMPCPAGCP
Query Conservation                   
 


       
 





 



 

 
 
  

   ..        
  
     
   
Alig confidence 









..


































.







..










.









Template Conservation            .. 

  
 


           












 .
  

             
  .     
   
Template Sequence  KAGQTKTKGY. . AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGVENKELKQRVLE. QAVTYPDKFS
Template Known Secondary structure 
SS


B


..
S
TTTS
TT

B
TTT.SS
SSS




T.





SS

Template Predicted Secondary structure 









..














.











.









Template SS confidence 















































































   340......... 350.........360.........370.........380.... .....390.........400..... ....410.....
 
   462.......470......... 480.......
Predicted Secondary structure 




.....

Query SS confidence 

















. . . . .







Query Sequence  VTLYDIMQQCWRSDPDKR. . . . . PTFETLQW
Query Conservation       

  

   
  
.....

   
  
Alig confidence 

















.....







Template Conservation      


  

  

  


        
  
Template Sequence  PASKDFCEALLQKDPEKRLGFRDGSCDGLRT
Template Known Secondary structure  T
SSSSSS

S
TTSTTTTTT
Template Predicted Secondary structure 











Template SS confidence 






























   418.420.........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D