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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank39Aligned Residues250
% Identity23%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EVDRRSVRLIRQIGAGQFGEVWEGRWN. VNVPVAVKKLKAGT. . . . ADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPI
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Template Sequence  PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL
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GGG
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   181........190.........200.........210.........220.........230.........240.........250.........260
 
   309310.........320.... .....330.........340.........350.........360.........370.........380....
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Query Sequence  LIVTELMQENLLTFLQ. . . . RRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILM
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Template Sequence  CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK
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   261........270.........280.........290.........300.........310.........320.........330.........340
 
   385....390.........400.........410.........420.........430......... 440.........450.........460
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Query Sequence  KENEYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGM. . . . TNAEVLQQVDAGYRMPCPAGC
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Template Sequence  AGQTKTKGY. . AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGEKVENKELKQRVLEQA. VTYPDKF
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   341........ 350.........360.........370.........380.... .....390.........400......... 410......
 
   461........470.........480 .......
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Query Sequence  PVTLYDIMQQCWRSDPDKRP. . . . . TFETLQW
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Template Sequence  SPASKDFCEALLQKDPEKRLGFRDGSCDGLRT
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BTTBSTTGGG
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   417..420.........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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