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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank258Aligned Residues219
% Identity25%Templatec2w4oA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type iv; PDBTitle: crystal structure of human camk4 in complex with 4-amino(2 sulfamoyl-phenylamino)-triazole-carbothioic acid (2,6-3 difluoro-phenyl)-amide)
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250......... 260.........270.........280.........290.........300.........310......
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Query Sequence  RSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKAGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVTELMQ
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Template Sequence  DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK. . . . . . . . . . . KIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT
Template Known Secondary structure  GT
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   44.....50.........60.........70........ .80.........90.........100.........110..
 
   317..320.........330.........340.........350.........360......... 370.........380.........390...
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Query Sequence  ENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNS. . . LSVKIADFGLARILMKENEYEART
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Template Sequence  GGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGTP. . . . . . . . . . . . .
Template Known Secondary structure  S
BTT
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   123......130.........140.........150.........160.........170.........180.........
 
   394.....400.........410.........420.........430.........440.........450.. .......460.........
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Query Sequence  GARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGY. . . . RMPCPAGCPVTLYDIMQ
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Template Sequence  . . . . . . GYCAPEILRGCAYGPEVDMWSVGIITYILLC. GFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVR
Template Known Secondary structure  ......GGS
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   206...210.........220.........230...... ...240.........250.........260.........270........
 
   470.........480.......
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Query Sequence  QCWRSDPDKRPTFETLQW
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Template Sequence  KLIVLDPKKRLTTFQALQ
Template Known Secondary structure  TTS
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   279280.........290......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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