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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank119Aligned Residues251
% Identity20%Templatec2vd5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:dmpk protein; PDBTitle: structure of human myotonic dystrophy protein kinase in2 complex with the bisindoylmaleide inhibitor bim viii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250......... 260.........270......... 280.........290.........300........
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Query Sequence  EVDRRSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKAGTADPTD. . . . FLAEAQIMKKLRHPKLLSLYAVCTRDEPI
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Template Sequence  RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL
Template Known Secondary structure  S

GGG
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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   309310.........320 .........330.........340.........350.........360.........370.........380.......
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Query Sequence  LIVTELMQENLL. TFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMKEN
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Template Sequence  YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG
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   145....150.........160.........170.........180.........190.........200.........210.........220....
 
   388.390.........400....... ..410.........420.........430.........440.........450.........460
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Query Sequence  EYEARTGARFPIKWTAPEAA. . . . . . . NYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMPCPAGC
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Template Sequence  T. VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY. GQTPFYADSTAETYGKIVHYKEHLSLPGV
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   225 ....230.........240.........250.........260.........270... ......280.........290.........300..
 
   461........470......... 480.......
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Query Sequence  PVTLYDIMQQCWRSDPDKR. . . PTFETLQW
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Template Sequence  PEEARDFIQRLLC. PPETRLGRGGAGDFRT
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   307..310......... 320.........330.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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