286 c2vagA_ Probab=100.00  E-value=1.3e-41  Score=227.78  Aligned_columns=253  Identities=23%

Q ss_pred             EECHHHEEEEECCCCCCCEEEEEEEEC--CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE------EEEEEEEEEC
Q ss_conf             114577376411254898289999976--98299999988750238999999999985599847------1388738668
Q batch____       234 EVDRRSVRLIRQIGAGQFGEVWEGRWN--VNVPVAVKKLKAGTADPTDFLAEAQIMKKLRHPKL------LSLYAVCTRD  305 (507)
Q Consensus       234 ~i~~~~~~l~~~lG~G~fG~V~~~~~~--~~~~VAvK~l~~~~~~~~~~~~E~~~l~~l~H~ni------v~~~g~~~~~  305 (507)
                      ++-.+.|++.++||+|+||.||+|+++  +++.||||+++.+....+.+++|+++|++|+|+|+      +.+.+...+.
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEEECCCCCCHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
Q ss_conf             9589999889888488-997438998999999999999999985204540403437100123222223322231121125
Q batch____       306 EPILIVTELMQENLLT-FLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILM  384 (507)
Q Consensus       306 ~~~~lv~E~~~g~ll~-~l~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~ih~dl~~~n~l~~~~~~~kl~DfGls~~~~  384 (507)
                      ..++++++++.++... ................+..++..++.++|...++|+|+++.|++++..+..++.+|+.+....
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~~  168 (330)
T c2vagA_          89 GHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTLI  168 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEES
T ss_pred             CEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCC
T ss_conf             00001221123675211122211101365655555445555543110122223455415898578862000345433444


Q ss_pred             CCCCEEEEECC---------CCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC-----
Q ss_conf             66740244203---------4340118977984389875789999999999999288899988798999999980-----
Q batch____       385 KENEYEARTGA---------RFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDA-----  450 (507)
Q Consensus       385 ~~~~~~~~~~~---------~~~~~y~aPE~~~~~~~s~ksDVwS~Gvil~Ei~t~G~~Pf~~~~~~~~~~~i~~-----  450 (507)
                      .........+.         .....+.+||......++.++|+|++|+++|++.+ ++.|+...+..+....+..     
T Consensus       169 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  247 (330)
T c2vagA_         169 NPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGPL  247 (330)
T ss_dssp             CCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCSC
T ss_pred             CCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf             4321000146633267542001210232100000111123542102258731004-889887589689999998513889


Q ss_pred             --------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             --------------------------------------8998987568999999999863689678699999999
Q batch____       451 --------------------------------------GYRMPCPAGCPVTLYDIMQQCWRSDPDKRPTFETLQW  487 (507)
Q Consensus       451 --------------------------------------g~~~~~p~~~p~~~~~li~~cl~~~P~~RPs~~~i~~  487 (507)
                                                            ....+.+..+++++.+||.+||+.||++|||+++|++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         248 PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             CHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             988974420121235465665321000111001233310023565458999999999866588111776789967


