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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank85Aligned Residues249
% Identity24%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250.........260. ........270 .........280.........290.........300.........310.....
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Query Sequence  RSVRLIRQIGAGQFGEVWEGRWNV. NVPVAVKKL. KAGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVTELM
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC
Template Known Secondary structure  TTTTT

TTT
S
TT

BTTB


SS


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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   316...320.........330.........340.........350.........360...... ...370.........380.........390..
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Query Sequence  QENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILI. . . NNSLSVKIADFGLARILMKENEYEAR
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Template Sequence  TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK
Template Known Secondary structure 
SGGGGGTTTSS

TT



SGGGSSSSTT




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TT

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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   393......400.........410.........420.........430.........440.........450....... ..460.........470
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Query Sequence  TGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMPCP. . AGCPVTLYDIMQQ
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Template Sequence  VGT. . . PYYVSPQVLEGL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIRR
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   186.. .190.........200 .........210......... 220.........230.........240.........250.........260
 
   471........480....... ..490.
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Query Sequence  CWRSDPDKRPTFETLQW. . KLED
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Template Sequence  LLTKSPKQRITSLQALEHEWFEK
Template Known Secondary structure  S
SSTTTS

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   262.......270.........280....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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